Wolfram Data Repository

Immediate Computable Access to Curated Contributed Data

Budding Yeast Network

Protein-protein interaction network in budding yeast

The Budding yeast network shows the protein-protein interaction in budding yeast. Full names of proteins are stored in "LongLabel" property.

(2361 vertices, 7182 edges)

Examples

Basic Examples

Retrieve the graph:

In[1]:=
ResourceData["Budding Yeast Network"]
Out[1]=

Summary properties:

In[2]:=
ResourceData["Budding Yeast Network", All]["Summary"]
Out[2]=

Basic Applications

Pick a protein from the graph:

In[3]:=
g = ResourceData["Budding Yeast Network"];
In[4]:=
protein = VertexList[g][[6]]
Out[4]=

Find the long label of the protein:

In[5]:=
longLabel = AnnotationValue[{g, protein}, "LongLabel"]
Out[1]=

Web search the protein:

In[6]:=
First[WebImageSearch[{longLabel}, "Thumbnails"]]
Out[6]=

Wolfram Research, "Budding Yeast Network" from the Wolfram Data Repository (2019)  

Data Resource History

  • Date Created:

Source Metadata

  • Citation:
    • Shiwei Sun, Lunjiang Ling, Nan Zhang, Guojie Li and Runsheng Chen: Topological structure analysis of the protein-protein interaction network in budding yeast. Nucleic Acids Research, 2003, Vol. 31, No. 9 2443-2450

Data Downloads

Publisher Information

  • Prepared for the Wolfram Data Repository By: Wolfram
  • Publisher of Record: Wolfram Research